STRuster

 STRuster results: 51809

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: NAD(P)-binding Rossmann-fold domains
Superfamily: NAD(P)-binding Rossmann-fold domains
Family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Species: Leishmania mexicana
Species SCOP sunid: 51809

 Set description
Number of entries: 16
SCOP Entries: d1a7kc1 d1i32c1 d1a7ka1 d1i32f1 d1i33c1 d1i32a1 d1i33b1 d1a7kb1 d1i32d1 d1i33d1 d1a7kd1 d1i32b1 d1i33a1 d1i33e1 d1i32e1 d1i33f1
Alignment File: 51809.alig
Aligned Sequences: 51809_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51809_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(59, 73), (353, 357)]
Uniprot Nr [(60, 74), (354, 358)]

 Invariant Regions
Region1
Alignment Nr[(0, 58), (74, 352)]
Uniprot Nr[(1, 59), (75, 353)]
Superposition51809_superp_1.pdb.gz
Rasmol Script51809_superp_1.rsm
View in Jmol