STRuster

 STRuster results: 51563

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Metallo-dependent hydrolases
Family: alpha-subunit of urease, catalytic domain
Protein: alpha-subunit of urease, catalytic domain
Species: Bacillus pasteurii
Species SCOP sunid: 51563

 Set description
Number of entries: 6
SCOP Entries: d4ubpc2 d1s3tc2 d1ubpc2 d3ubpc2 d2ubpc2 d1ie7c2
Alignment File: 51563.alig
Aligned Sequences: 51563_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51563_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(185, 189), (203, 206)]
Uniprot Nr [(315, 319), (333, 336)]

 Invariant Regions
Region1
Alignment Nr[(0, 184), (207, 439)]
Uniprot Nr[(131, 314), (337, 569)]
Superposition51563_superp_1.pdb.gz
Rasmol Script51563_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(190, 202)]
Uniprot Nr[(320, 332)]
Superposition51563_superp_2.pdb.gz
Rasmol Script51563_superp_2.rsm
View in Jmol