STRuster

 STRuster results: 51456

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: (Trans)glycosidases
Family: Amylase, catalytic domain
Protein: Cyclodextrin glycosyltransferase
Species: Alkalophilic bacillus sp., strain 1011
Species SCOP sunid: 51456

 Set description
Number of entries: 16
SCOP Entries: d1i75a4 d1deda4 d1i75b4 d1pama4 d1v3kb4 d1d7fa4 d1v3mb4 d1v3ka4 d1v3la4 d1pamb4 d1dedb4 d1v3ja4 d1v3jb4 d1d7fb4 d1v3ma4 d1v3lb4
Alignment File: 51456.alig
Aligned Sequences: 51456_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51456_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(334, 335)]
Uniprot Nr [(362, 363)]

 Invariant Regions
Region1
Alignment Nr[(0, 333), (336, 405)]
Uniprot Nr[(28, 361), (364, 433)]
Superposition51456_superp_1.pdb.gz
Rasmol Script51456_superp_1.rsm
View in Jmol