STRuster

 STRuster results: 51389

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Ribulose-phoshate binding barrel
Family: Tryptophan biosynthesis enzymes
Protein: Trp synthase alpha-subunit
Species: Salmonella typhimurium
Species SCOP sunid: 51389

 Set description
Number of entries: 30
SCOP Entries: d1a5ba_ d1kfja_ d1k7xa_ d1c9da_ d2wsya_ d1qoqa_ d1cw2a_ d1k8ya_ d1k8za_ d1k3ua_ d1ubsa_ d1k7ea_ d1c29a_ d1a50a_ d1ttpa_ d1kfca_ d1c8va_ d1kfba_ d1beua_ d2tysa_ d1kfka_ d1k8xa_ d1k7fa_ d1kfea_ d1qopa_ d1a5aa_ d1ttqa_ d2trsa_ d1a5sa_ d1cx9a_
Alignment File: 51389.alig
Aligned Sequences: 51389_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51389_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(175, 191), (210, 211), (232, 233), (266, 267)]
Uniprot Nr [(176, 192), (211, 212), (233, 234), (267, 268)]

 Invariant Regions
Region1
Alignment Nr[(0, 174), (192, 209), (212, 231), (234, 265)]
Uniprot Nr[(1, 175), (193, 210), (213, 232), (235, 266)]
Superposition51389_superp_1.pdb.gz
Rasmol Script51389_superp_1.rsm
View in Jmol