STRuster

 STRuster results: 51380

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Ribulose-phoshate binding barrel
Family: Decarboxylase
Protein: Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 51380

 Set description
Number of entries: 8
SCOP Entries: d1dqxb_ d1dqwa_ d1dqwd_ d1dqxd_ d1dqwc_ d1dqxa_ d1dqxc_ d1dqwb_
Alignment File: 51380.alig
Aligned Sequences: 51380_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51380_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(95, 97), (149, 152), (204, 216), (238, 239), (265, 266)]
Uniprot Nr [(96, 98), (150, 153), (205, 217), (239, 240), (266, 267)]

 Invariant Regions
Region1
Alignment Nr[(0, 94), (98, 148), (153, 203), (240, 264)]
Uniprot Nr[(1, 95), (99, 149), (154, 204), (241, 265)]
Superposition51380_superp_1.pdb.gz
Rasmol Script51380_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 94), (98, 148), (217, 237), (240, 264)]
Uniprot Nr[(1, 95), (99, 149), (218, 238), (241, 265)]
Superposition51380_superp_2.pdb.gz
Rasmol Script51380_superp_2.rsm
View in Jmol