STRuster

 STRuster results: 51008

 SCOP 1.71 classification
Class: All beta proteins
Fold: 8-bladed beta-propeller
Superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Protein: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Species: Pseudomonas aeruginosa
Species SCOP sunid: 51008

 Set description
Number of entries: 16
SCOP Entries: d1bl9a2 d1nnoa2 d1n90a2 d1n90b2 d1n15b2 d1nirb2 d1gjqb2 d1n15a2 d1gjqa2 d1nira2 d1bl9b2 d1nnob2 d1hzua2 d1n50a2 d1hzva2 d1n50b2
Alignment File: 51008.alig
Aligned Sequences: 51008_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51008_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(224, 225), (246, 252)]
Uniprot Nr [(367, 368), (389, 395)]

 Invariant Regions
Region1
Alignment Nr[(0, 223), (226, 245), (253, 425)]
Uniprot Nr[(143, 366), (369, 388), (396, 568)]
Superposition51008_superp_1.pdb.gz
Rasmol Script51008_superp_1.rsm
View in Jmol