STRuster

 STRuster results: 50921

 SCOP 1.71 classification
Class: All beta proteins
Fold: triple barrel
Superfamily: Rap30/74 interaction domains
Family: Rap30/74 interaction domains
Protein: TFIIF alpha subunit, Rap74
Species: Human (Homo sapiens)
Species SCOP sunid: 50921

 Set description
Number of entries: 4
SCOP Entries: d1f3ud_ d1f3uh_ d1f3ub_ d1f3uf_
Alignment File: 50921.alig
Aligned Sequences: 50921_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50921_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 9), (49, 57), (68, 86), (111, 114), (148, 150)]
Uniprot Nr [(5, 14), (54, 62), (73, 91), (116, 119), (153, 155)]

 Invariant Regions
Region1
Alignment Nr[(10, 48), (58, 67), (87, 110), (115, 147), (151, 163)]
Uniprot Nr[(15, 53), (63, 72), (92, 115), (120, 152), (156, 168)]
Superposition50921_superp_1.pdb.gz
Rasmol Script50921_superp_1.rsm
View in Jmol