STRuster

 STRuster results: 50914

 SCOP 1.71 classification
Class: All beta proteins
Fold: Mannose 6-phosphate receptor domain
Superfamily: Mannose 6-phosphate receptor domain
Family: Mannose 6-phosphate receptor domain
Protein: Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain
Species: Cow (Bos taurus)
Species SCOP sunid: 50914

 Set description
Number of entries: 6
SCOP Entries: d1m6pb_ d1c39b_ d1keoa_ d1m6pa_ d1c39a_ d1keob_
Alignment File: 50914.alig
Aligned Sequences: 50914_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50914_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 10), (33, 40), (54, 56), (101, 102), (129, 139)]
Uniprot Nr [(31, 41), (64, 71), (85, 87), (132, 133), (160, 170)]

 Invariant Regions
Region1
Alignment Nr[(11, 32), (41, 53), (57, 100), (103, 128), (140, 151)]
Uniprot Nr[(42, 63), (72, 84), (88, 131), (134, 159), (171, 182)]
Superposition50914_superp_1.pdb.gz
Rasmol Script50914_superp_1.rsm
View in Jmol