STRuster

 STRuster results: 50846

 SCOP 1.71 classification
Class: All beta proteins
Fold: Lipocalins
Superfamily: Lipocalins
Family: Retinol binding protein-like
Protein: Nitrophorin 4
Species: Rhodnius prolixus
Species SCOP sunid: 50846

 Set description
Number of entries: 22
SCOP Entries: d1ikea_ d1x8pa_ d1koia_ d1sxua_ d1sy3a_ d1x8oa_ d1d2ua_ d1ikja_ d1sy0a_ d1eqda_ d1sxxa_ d1sxwa_ d1erxa_ d1np4a_ d1x8qa_ d1d3sa_ d1ml7a_ d1sy2a_ d1x8na_ d1sy1a_ d1u0xa_ d1sxya_
Alignment File: 50846.alig
Aligned Sequences: 50846_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50846_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(31, 34), (127, 129)]
Uniprot Nr [(53, 56), (149, 151)]

 Invariant Regions
Region1
Alignment Nr[(0, 30), (35, 126), (130, 183)]
Uniprot Nr[(22, 52), (57, 148), (152, 205)]
Superposition50846_superp_1.pdb.gz
Rasmol Script50846_superp_1.rsm
View in Jmol