STRuster

 STRuster results: 50836

 SCOP 1.71 classification
Class: All beta proteins
Fold: Lipocalins
Superfamily: Lipocalins
Family: Retinol binding protein-like
Protein: Neutrophil gelatinase-associated lipocalin (NGAL)
Species: Human (Homo sapiens)
Species SCOP sunid: 50836

 Set description
Number of entries: 6
SCOP Entries: d1dfvb_ d1l6mc_ d1dfva_ d1l6mb_ d1l6ma_ d1qqsa_
Alignment File: 50836.alig
Aligned Sequences: 50836_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50836_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (96, 97)]
Uniprot Nr [(24, 25), (120, 121)]

 Invariant Regions
Region1
Alignment Nr[(2, 95), (98, 173)]
Uniprot Nr[(26, 119), (122, 197)]
Superposition50836_superp_1.pdb.gz
Rasmol Script50836_superp_1.rsm
View in Jmol