STRuster

 STRuster results: 50828

 SCOP 1.71 classification
Class: All beta proteins
Fold: Lipocalins
Superfamily: Lipocalins
Family: Retinol binding protein-like
Protein: beta-Lactoglobulin
Species: Cow (Bos taurus)
Species SCOP sunid: 50828

 Set description
Number of entries: 13
SCOP Entries: d1gx9a_ d1b8ea_ d1bebb_ d1bsy__ d1qg5a_ d1gx8a_ d3blg__ d1beba_ d1b0o__ d1bsoa_ d1gxaa_ d1bsqa_ d1uz2x_
Alignment File: 50828.alig
Aligned Sequences: 50828_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50828_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (83, 87), (109, 114), (125, 127), (151, 161)]
Uniprot Nr [(17, 20), (100, 104), (126, 131), (142, 144), (168, 178)]

 Invariant Regions
Region1
Alignment Nr[(4, 82), (88, 108), (115, 124), (128, 150)]
Uniprot Nr[(21, 99), (105, 125), (132, 141), (145, 167)]
Superposition50828_superp_1.pdb.gz
Rasmol Script50828_superp_1.rsm
View in Jmol