STRuster

 STRuster results: 50587

 SCOP 1.71 classification
Class: All beta proteins
Fold: Trypsin-like serine proteases
Superfamily: Trypsin-like serine proteases
Family: Eukaryotic proteases
Protein: Urokinase-type plasminogen activator (LMW U-PA), catalytic domain
Species: Human (Homo sapiens)
Species SCOP sunid: 50587

 Set description
Number of entries: 28
SCOP Entries: d1o5a.1 d1gj9.1 d1gjb.1 d1gjd.1 d1gj7.1 d1o5c.1 d1c5y.1 d1gj8.1 d1owea_ d1f5la_ d1o3p.1 d1sc8u_ d1c5w.1 d1sqoa_ d1f92a_ d1f5ku_ d1gi8.1 d1gi7.1 d1owda_ d1sqta_ d1owha_ d1gi9.1 d1gjc.1 d1c5z.1 d1o5b.1 d1sqaa_ d1gja.1 d1c5x.1
Alignment File: 50587.alig
Aligned Sequences: 50587_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50587_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (143, 144), (263, 266)]
Uniprot Nr [(160, 164), (303, 304), (423, 426)]

 Invariant Regions
Region1
Alignment Nr[(5, 142), (145, 262)]
Uniprot Nr[(165, 302), (305, 422)]
Superposition50587_superp_1.pdb.gz
Rasmol Script50587_superp_1.rsm
View in Jmol