STRuster

 STRuster results: 50350

 SCOP 1.71 classification
Class: All beta proteins
Fold: PRC-barrel domain
Superfamily: PRC-barrel domain
Family: Photosynthetic reaction centre, H-chain, cytoplasmic domain
Protein: Photosynthetic reaction centre
Species: Rhodobacter sphaeroides
Species SCOP sunid: 50350

 Set description
Number of entries: 42
SCOP Entries: d1rzzt1 d1dv6t1 d1dv3h1 d1aigp1 d1e14h1 d1m3xh1 d1ds8t1 d1e6dh1 d1jgzh1 d1ds8h1 d1aigh1 d1jh0h1 d1s00t1 d1l9jh1 d1k6lh1 d1jgyh1 d1mpsh1 d1l9bh1 d1rqkh1 d1fnph1 d1ry5h1 d1rg5h1 d1rvjh1 d1rzzh1 d1aijt1 d1qovh1 d1dv3t1 d1pcrh1 d1fnqh1 d1jgxh1 d1rgnh1 d1rzhh1 d1dv6h1 d1umxh1 d1l9jt1 d1k6nh1 d1ogvh1 d1kbyh1 d1jgwh1 d1f6nh1 d1s00h1 d1aijh1
Alignment File: 50350.alig
Aligned Sequences: 50350_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50350_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(43, 46), (213, 222)]
Uniprot Nr [(79, 82), (249, 258)]

 Invariant Regions
Region1
Alignment Nr[(0, 42), (47, 212)]
Uniprot Nr[(36, 78), (83, 248)]
Superposition50350_superp_1.pdb.gz
Rasmol Script50350_superp_1.rsm
View in Jmol