STRuster

 STRuster results: 50314

 SCOP 1.71 classification
Class: All beta proteins
Fold: OB-fold
Superfamily: Nucleic acid-binding proteins
Family: DNA ligase/mRNA capping enzyme postcatalytic domain
Protein: NAD+-dependent DNA ligase
Species: Thermus filiformis
Species SCOP sunid: 50314

 Set description
Number of entries: 4
SCOP Entries: d1dgsa2 d1v9pa2 d1v9pb2 d1dgsb2
Alignment File: 50314.alig
Aligned Sequences: 50314_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50314_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (29, 35), (54, 85)]
Uniprot Nr [(318, 321), (347, 353), (372, 403)]

 Invariant Regions
Region1
Alignment Nr[(4, 28), (36, 53)]
Uniprot Nr[(322, 346), (354, 371)]
Superposition50314_superp_1.pdb.gz
Rasmol Script50314_superp_1.rsm
View in Jmol