STRuster

STRuster results: 50268

SCOP 1.71 classification

Class:	All beta proteins
Fold:	OB-fold
Superfamily:	Nucleic acid-binding proteins
Family:	Single strand DNA-binding domain, SSB
Protein:	Replication protein A 70 KDa subunit (RPA70)
Species:	Human (Homo sapiens)
Species SCOP sunid:	50268

Set description

Number of entries:	8
SCOP Entries:	d1jmca1 d1jmca2 d1fgub1 d1fgub2 d1l1oc_ d1l1of_ d1fgua1 d1fgua2
Alignment File:	50268.alig
Aligned Sequences:	50268_alig.fasta

Hierarchical clustering

Dissimilary matrix:

50268_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(11, 14), (32, 37), (91, 92), (107, 118), (151, 158), (188, 189), (203, 208), (237, 244), (292, 303), (363, 365), (397, 398)]
Uniprot Nr	[(192, 195), (213, 218), (272, 273), (288, 299), (332, 339), (369, 370), (384, 389), (418, 425), (473, 484), (544, 546), (578, 579)]

Invariant Regions

Region	1
Alignment Nr	[(0, 10), (15, 31), (38, 90), (93, 106), (119, 150), (159, 187), (190, 202), (209, 236), (304, 362), (366, 396), (399, 435)]
Uniprot Nr	[(181, 191), (196, 212), (219, 271), (274, 287), (300, 331), (340, 368), (371, 383), (390, 417), (485, 543), (547, 577), (580, 616)]
Superposition	-
Region	2
Alignment Nr	[(0, 10), (15, 31), (38, 90), (93, 106), (159, 187), (190, 202), (209, 236), (245, 291), (304, 362), (366, 396), (399, 435)]
Uniprot Nr	[(181, 191), (196, 212), (219, 271), (274, 287), (340, 368), (371, 383), (390, 417), (426, 472), (485, 543), (547, 577), (580, 616)]
Superposition	-