STRuster

 STRuster results: 50171

 SCOP 1.71 classification
Class: All beta proteins
Fold: PDZ domain-like
Superfamily: PDZ domain-like
Family: Tail specific protease PDZ domain
Protein: Photosystem II D1 C-terminal processing protease
Species: Algae (Scenedesmus obliquus)
Species SCOP sunid: 50171

 Set description
Number of entries: 4
SCOP Entries: d1fc7a3 d1fc6a3 d1fc9a3 d1fcfa3
Alignment File: 50171.alig
Aligned Sequences: 50171_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 50171_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (14, 18)]
Uniprot Nr [(157, 157), (171, 175)]

 Invariant Regions
Region1
Alignment Nr[(1, 13), (19, 92)]
Uniprot Nr[(158, 170), (176, 248)]
Superposition50171_superp_1.pdb.gz
Rasmol Script50171_superp_1.rsm
View in Jmol