STRuster

 STRuster results: 49897

 SCOP 1.71 classification
Class: All beta proteins
Fold: Baculovirus p35 protein
Superfamily: Baculovirus p35 protein
Family: Baculovirus p35 protein
Protein: Baculovirus p35 protein
Species: AcMNPV (Autographa californica nuclear polyhedrosis virus)
Species SCOP sunid: 49897

 Set description
Number of entries: 8
SCOP Entries: d1i3pa_ d1i3sa_ d1p35b_ d1p35a_ d1i3sc_ d1i4ea_ d1p35c_ d1i3sb_
Alignment File: 49897.alig
Aligned Sequences: 49897_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49897_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 10), (31, 39), (55, 59), (81, 83), (94, 101), (115, 128), (141, 164), (233, 235), (249, 255), (296, 298)]
Uniprot Nr [(2, 12), (33, 41), (57, 61), (83, 85), (96, 103), (117, 130), (143, 166), (235, 237), (251, 257), (298, 299)]

 Invariant Regions
Region1
Alignment Nr[(11, 30), (40, 54), (60, 80), (102, 114), (129, 140), (165, 232), (236, 248), (256, 295)]
Uniprot Nr[(13, 32), (42, 56), (62, 82), (104, 116), (131, 142), (167, 234), (238, 250), (258, 297)]
Superposition49897_superp_1.pdb.gz
Rasmol Script49897_superp_1.rsm
View in Jmol