| STRuster results: 49850 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | TNF-like |
| Superfamily: | TNF-like |
| Family: | TNF-like |
| Protein: | Tumor necrosis factor (TNF) |
| Species: | Mouse (Mus musculus) |
| Species SCOP sunid: | 49850 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d2tnfb_ d2tnfc_ d2tnfa_ |
| Alignment File: | 49850.alig |
| Aligned Sequences: | 49850_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49850_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(75, 79), (92, 100)] |
| Uniprot Nr | [(163, 167), (180, 188)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 74), (80, 91), (101, 147)] |
| Uniprot Nr | [(88, 162), (168, 179), (189, 235)] |
| Superposition | 49850_superp_1.pdb.gz |
| Rasmol Script | 49850_superp_1.rsm |
| View in Jmol | |
