STRuster

 STRuster results: 49630

 SCOP 1.71 classification
Class: All beta proteins
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: Positive stranded ssRNA viruses
Family: Comoviridae-like VP
Protein: Nepovirus capsid protein
Species: TRSV (Tobacco ringspot virus)
Species SCOP sunid: 49630

 Set description
Number of entries: 3
SCOP Entries: d1a6ca3 d1a6ca2 d1a6ca1
Alignment File: 49630.alig
Aligned Sequences: 49630_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49630_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 512)]
Uniprot Nr[(3, 515)]
Superposition-