STRuster

 STRuster results: 49618

 SCOP 1.71 classification
Class: All beta proteins
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: Satellite viruses
Family: Satellite viruses
Protein: SPMV coat protein
Species: Satellite panicum mosaic virus
Species SCOP sunid: 49618

 Set description
Number of entries: 5
SCOP Entries: d1stma_ d1stmd_ d1stmb_ d1stme_ d1stmc_
Alignment File: 49618.alig
Aligned Sequences: 49618_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49618_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 140)]
Uniprot Nr[(17, 157)]
Superposition49618_superp_1.pdb.gz
Rasmol Script49618_superp_1.rsm
View in Jmol