STRuster

 STRuster results: 49546

 SCOP 1.71 classification
Class: All beta proteins
Fold: Cupredoxin-like
Superfamily: Cupredoxins
Family: Periplasmic domain of cytochrome c oxidase subunit II
Protein: Cytochrome c oxidase
Species: Paracoccus denitrificans
Species SCOP sunid: 49546

 Set description
Number of entries: 2
SCOP Entries: d1qleb1 d1ar1b1
Alignment File: 49546.alig
Aligned Sequences: 49546_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 49546_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(50, 52), (88, 89), (139, 144)]
Uniprot Nr [(187, 189), (225, 226), (276, 281)]

 Invariant Regions
Region1
Alignment Nr[(0, 49), (53, 87), (90, 138)]
Uniprot Nr[(137, 186), (190, 224), (227, 275)]
Superposition49546_superp_1.pdb.gz
Rasmol Script49546_superp_1.rsm
View in Jmol