STRuster

 STRuster results: 49506

 SCOP 1.71 classification
Class: All beta proteins
Fold: Cupredoxin-like
Superfamily: Cupredoxins
Family: Plastocyanin/azurin-like
Protein: Amicyanin
Species: Paracoccus denitrificans
Species SCOP sunid: 49506

 Set description
Number of entries: 21
SCOP Entries: d1sf3a_ d1t5ka_ d1sfhb_ d1sfha_ d1mg2o_ d1mg3o_ d1mg2g_ d1t5kd_ d1mg3g_ d1sfda_ d1bxaa_ d1sf5a_ d1sfdb_ d1aac__ d1mg2k_ d1mg3k_ d1mg2c_ d2raca_ d1mg3c_ d1t5kc_ d1t5kb_
Alignment File: 49506.alig
Aligned Sequences: 49506_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49506_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(15, 18)]
Uniprot Nr [(42, 45)]

 Invariant Regions
Region1
Alignment Nr[(0, 14), (19, 104)]
Uniprot Nr[(27, 41), (46, 131)]
Superposition49506_superp_1.pdb.gz
Rasmol Script49506_superp_1.rsm
View in Jmol