STRuster

 STRuster results: 49450

 SCOP 1.71 classification
Class: All beta proteins
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
Family: Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
Protein: Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 49450

 Set description
Number of entries: 5
SCOP Entries: d1bw8a_ d1hesa_ d1bxxa_ d1i31a_ d1gw5m1
Alignment File: 49450.alig
Aligned Sequences: 49450_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49450_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(58, 61), (81, 85), (215, 218)]
Uniprot Nr [(217, 220), (240, 244), (374, 377)]

 Invariant Regions
Region1
Alignment Nr[(0, 57), (62, 80), (86, 214), (219, 276)]
Uniprot Nr[(159, 216), (221, 239), (245, 373), (378, 435)]
Superposition49450_superp_1.pdb.gz
Rasmol Script49450_superp_1.rsm
View in Jmol