STRuster

 STRuster results: 49445

 SCOP 1.71 classification
Class: All beta proteins
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: Cytochrome f, large domain
Family: Cytochrome f, large domain
Protein: Cytochrome f, large domain
Species: Chlamydomonas reinhardtii
Species SCOP sunid: 49445

 Set description
Number of entries: 15
SCOP Entries: d1q90a1 d1e2wb1 d1cfmc1 d1e2wa1 d1e2zc1 d1ewhb1 d1ewha1 d1e2vc1 d1e2za1 d1e2zb1 d1ewhc1 d1e2va1 d1cfmb1 d1e2vb1 d1cfma1
Alignment File: 49445.alig
Aligned Sequences: 49445_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49445_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(249, 250)]
Uniprot Nr [(281, 282)]

 Invariant Regions
Region1
Alignment Nr[(0, 248)]
Uniprot Nr[(32, 280)]
Superposition49445_superp_1.pdb.gz
Rasmol Script49445_superp_1.rsm
View in Jmol