STRuster

 STRuster results: 49191

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: I set domains
Protein: NGF binding domain of trkA receptor
Species: Human (Homo sapiens)
Species SCOP sunid: 49191

 Set description
Number of entries: 3
SCOP Entries: d1he7a_ d1wwwy_ d1wwwx_
Alignment File: 49191.alig
Aligned Sequences: 49191_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49191_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(13, 15), (67, 68), (97, 106)]
Uniprot Nr [(295, 297), (349, 350), (379, 388)]

 Invariant Regions
Region1
Alignment Nr[(16, 66), (69, 96)]
Uniprot Nr[(298, 348), (351, 378)]
Superposition49191_superp_1.pdb.gz
Rasmol Script49191_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 12)]
Uniprot Nr[(282, 294)]
Superposition49191_superp_2.pdb.gz
Rasmol Script49191_superp_2.rsm
View in Jmol