STRuster

 STRuster results: 49161

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: I set domains
Protein: Vascular cell adhesion molecule-1 (VCAM-1)
Species: Human (Homo sapiens)
Species SCOP sunid: 49161

 Set description
Number of entries: 5
SCOP Entries: d1vscb2 d1vsca2 d1vcaa2 d1ij9a2 d1vcab2
Alignment File: 49161.alig
Aligned Sequences: 49161_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49161_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 89)]
Uniprot Nr[(25, 114)]
Superposition49161_superp_1.pdb.gz
Rasmol Script49161_superp_1.rsm
View in Jmol