STRuster

 STRuster results: 49126

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: C1 set domains (antibody constant domain-like)
Protein: T-cell antigen receptor
Species: Mouse (Mus musculus), alpha-chain
Species SCOP sunid: 49126

 Set description
Number of entries: 4
SCOP Entries: d1nfda2 d1lp9e2 d1nfdc2 d1lp9l2
Alignment File: 49126.alig
Aligned Sequences: 49126_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 49126_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(13, 19), (49, 89)]
Uniprot Nr [(16, 22), (52, 92)]

 Invariant Regions
Region1
Alignment Nr[(0, 12), (20, 48)]
Uniprot Nr[(3, 15), (23, 51)]
Superposition49126_superp_1.pdb.gz
Rasmol Script49126_superp_1.rsm
View in Jmol