| STRuster results: 48742 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Immunoglobulin-like beta-sandwich |
| Superfamily: | Immunoglobulin |
| Family: | V set domains (antibody variable domain-like) |
| Protein: | CD2, first domain |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 48742 |
| Set description |
| Number of entries: | 10 |
| SCOP Entries: | d1a7bb_ d1cdcb_ d1cdca_ d1a6pb_ d1a7bc_ d1a64b_ d1a7ba_ d1a6pa_ d1a7bd_ d1a64a_ |
| Alignment File: | 48742.alig |
| Aligned Sequences: | 48742_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 48742_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(15, 17), (37, 62), (78, 79), (94, 95)] |
| Uniprot Nr | [(41, 43), (63, 88), (104, 105), (120, 121)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 14), (18, 36)] |
| Uniprot Nr | [(26, 40), (44, 62)] |
| Superposition | 48742_superp_1.pdb.gz |
| Rasmol Script | 48742_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(63, 77), (80, 93)] |
| Uniprot Nr | [(89, 103), (106, 119)] |
| Superposition | 48742_superp_2.pdb.gz |
| Rasmol Script | 48742_superp_2.rsm |
| View in Jmol | |
