STRuster

 STRuster results: 48736

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: V set domains (antibody variable domain-like)
Protein: CD8
Species: Mouse (Mus musculus)
Species SCOP sunid: 48736

 Set description
Number of entries: 6
SCOP Entries: d1bqhh_ d1nezg_ d1bqhk_ d1bqhi_ d1nezh_ d1bqhg_
Alignment File: 48736.alig
Aligned Sequences: 48736_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48736_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 16), (30, 82), (118, 124)]
Uniprot Nr [(28, 44), (58, 110), (146, 152)]

 Invariant Regions
Region1
Alignment Nr[(17, 29), (83, 117)]
Uniprot Nr[(45, 57), (111, 145)]
Superposition48736_superp_1.pdb.gz
Rasmol Script48736_superp_1.rsm
View in Jmol