STRuster

 STRuster results: 48626

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Phospholipase A2, PLA2
Superfamily: Phospholipase A2, PLA2
Family: Vertebrate phospholipase A2
Protein: Snake phospholipase A2
Species: Indian cobra (Naja naja naja)
Species SCOP sunid: 48626

 Set description
Number of entries: 4
SCOP Entries: d1a3fa_ d1a3d__ d1a3fb_ d1a3fc_
Alignment File: 48626.alig
Aligned Sequences: 48626_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48626_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(29, 33), (117, 118)]
Uniprot Nr [(30, 34), (118, 119)]

 Invariant Regions
Region1
Alignment Nr[(0, 28), (34, 116)]
Uniprot Nr[(1, 29), (35, 117)]
Superposition48626_superp_1.pdb.gz
Rasmol Script48626_superp_1.rsm
View in Jmol