STRuster

 STRuster results: 48590

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Terpenoid synthases
Superfamily: Terpenoid synthases
Family: Aristolochene/pentalenene synthase
Protein: Pentalenene synthase
Species: Streptomyces sp., UC5319
Species SCOP sunid: 48590

 Set description
Number of entries: 6
SCOP Entries: d1hm7b_ d1ps1a_ d1hm7a_ d1hm4b_ d1hm4a_ d1ps1b_
Alignment File: 48590.alig
Aligned Sequences: 48590_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48590_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 17), (81, 90), (125, 128), (153, 167), (215, 230), (242, 249), (279, 281), (304, 310)]
Uniprot Nr [(2, 19), (83, 92), (127, 130), (155, 169), (217, 232), (244, 251), (281, 283), (306, 312)]

 Invariant Regions
Region1
Alignment Nr[(18, 80), (91, 124), (129, 152), (168, 214), (250, 278), (282, 303)]
Uniprot Nr[(20, 82), (93, 126), (131, 154), (170, 216), (252, 280), (284, 305)]
Superposition48590_superp_1.pdb.gz
Rasmol Script48590_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(18, 80), (91, 124), (168, 214), (231, 241), (250, 278), (282, 303)]
Uniprot Nr[(20, 82), (93, 126), (170, 216), (233, 243), (252, 280), (284, 305)]
Superposition48590_superp_2.pdb.gz
Rasmol Script48590_superp_2.rsm
View in Jmol