STRuster

 STRuster results: 48535

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Family: Nuclear receptor ligand-binding domain
Protein: Ultraspiracle protein, usp
Species: Drosophila melanogaster
Species SCOP sunid: 48535

 Set description
Number of entries: 6
SCOP Entries: d1hg4a_ d1hg4d_ d1hg4e_ d1hg4f_ d1hg4c_ d1hg4b_
Alignment File: 48535.alig
Aligned Sequences: 48535_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48535_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(210, 210), (263, 264)]
Uniprot Nr [(448, 448), (501, 502)]

 Invariant Regions
Region1
Alignment Nr[(0, 209), (211, 262)]
Uniprot Nr[(238, 447), (449, 500)]
Superposition48535_superp_1.pdb.gz
Rasmol Script48535_superp_1.rsm
View in Jmol