STRuster

 STRuster results: 48518

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Family: Nuclear receptor ligand-binding domain
Protein: Progesterone receptor
Species: Human (Homo sapiens)
Species SCOP sunid: 48518

 Set description
Number of entries: 8
SCOP Entries: d1e3kb_ d1a28b_ d1sr7a_ d1sqna_ d1e3ka_ d1sqnb_ d1a28a_ d1sr7b_
Alignment File: 48518.alig
Aligned Sequences: 48518_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48518_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(21, 27), (106, 112), (176, 183), (250, 251)]
Uniprot Nr [(703, 709), (788, 794), (858, 865), (932, 933)]

 Invariant Regions
Region1
Alignment Nr[(0, 20), (28, 105), (113, 175), (184, 249)]
Uniprot Nr[(682, 702), (710, 787), (795, 857), (866, 931)]
Superposition48518_superp_1.pdb.gz
Rasmol Script48518_superp_1.rsm
View in Jmol