STRuster

 STRuster results: 48428

 SCOP 1.71 classification
Class: All alpha proteins
Fold: alpha-alpha superhelix
Superfamily: Sec7 domain
Family: Sec7 domain
Protein: Exchange factor ARNO
Species: Human (Homo sapiens)
Species SCOP sunid: 48428

 Set description
Number of entries: 5
SCOP Entries: d1s9de_ d1r8se_ d1r8me_ d1r8qf_ d1r8qe_
Alignment File: 48428.alig
Aligned Sequences: 48428_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48428_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 11), (50, 51), (151, 152), (166, 174)]
Uniprot Nr [(51, 62), (101, 102), (201, 202), (216, 224)]

 Invariant Regions
Region1
Alignment Nr[(12, 49), (52, 150), (153, 165), (175, 199)]
Uniprot Nr[(63, 100), (103, 200), (203, 215), (225, 249)]
Superposition48428_superp_1.pdb.gz
Rasmol Script48428_superp_1.rsm
View in Jmol