STRuster

 STRuster results: 48380

 SCOP 1.71 classification
Class: All alpha proteins
Fold: alpha-alpha superhelix
Superfamily: ARM repeat
Family: Armadillo repeat
Protein: Importin beta
Species: Mouse (Mus musculus)
Species SCOP sunid: 48380

 Set description
Number of entries: 2
SCOP Entries: d1gcjb_ d1gcja_
Alignment File: 48380.alig
Aligned Sequences: 48380_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 48380_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5), (22, 22), (348, 353), (463, 471)]
Uniprot Nr [(0, 1), (17, 17), (335, 340), (446, 454)]

 Invariant Regions
Region1
Alignment Nr[(6, 21), (23, 347)]
Uniprot Nr[(1, 16), (18, 334)]
Superposition48380_superp_1.pdb.gz
Rasmol Script48380_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(23, 347), (354, 462)]
Uniprot Nr[(18, 334), (341, 445)]
Superposition48380_superp_2.pdb.gz
Rasmol Script48380_superp_2.rsm
View in Jmol