STRuster

 STRuster results: 48377

 SCOP 1.71 classification
Class: All alpha proteins
Fold: alpha-alpha superhelix
Superfamily: ARM repeat
Family: Armadillo repeat
Protein: Importin alpha
Species: Mouse (Mus musculus)
Species SCOP sunid: 48377

 Set description
Number of entries: 8
SCOP Entries: d1q1sc_ d1q1tc_ d1pjmb_ d1ejli_ d1iala_ d1ejyi_ d1iq1c_ d1pjnb_
Alignment File: 48377.alig
Aligned Sequences: 48377_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48377_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(26, 27), (452, 453)]
Uniprot Nr [(70, 71), (496, 497)]

 Invariant Regions
Region1
Alignment Nr[(0, 25), (28, 451)]
Uniprot Nr[(44, 69), (72, 495)]
Superposition48377_superp_1.pdb.gz
Rasmol Script48377_superp_1.rsm
View in Jmol