STRuster

 STRuster results: 48337

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA repair protein MutS, domain III
Superfamily: DNA repair protein MutS, domain III
Family: DNA repair protein MutS, domain III
Protein: DNA repair protein MutS, domain III
Species: Thermus aquaticus
Species SCOP sunid: 48337

 Set description
Number of entries: 8
SCOP Entries: d1nnea1 d1ewqa1 d1ewra1 d1nneb1 d1ewqb1 d1ewrb1 d1fw6a1 d1fw6b1
Alignment File: 48337.alig
Aligned Sequences: 48337_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48337_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (60, 61), (85, 86), (101, 101), (124, 130), (159, 216)]
Uniprot Nr [(267, 269), (327, 328), (352, 353), (368, 368), (391, 397), (426, 482)]

 Invariant Regions
Region1
Alignment Nr[(3, 59), (62, 84), (87, 100), (102, 123), (131, 158), (217, 275)]
Uniprot Nr[(270, 326), (329, 351), (354, 367), (369, 390), (398, 425), (483, 541)]
Superposition48337_superp_1.pdb.gz
Rasmol Script48337_superp_1.rsm
View in Jmol