STRuster

 STRuster results: 48238

 SCOP 1.71 classification
Class: All alpha proteins
Fold: alpha/alpha toroid
Superfamily: Chondroitin AC/alginate lyase
Family: Hyaluronate lyase-like catalytic, N-terminal domain
Protein: Hyaluronate lyase
Species: Streptococcus pneumoniae
Species SCOP sunid: 48238

 Set description
Number of entries: 15
SCOP Entries: d1loha1 d1n7pa1 d1ojpa1 d1egua1 d1c82a1 d1n7na1 d1w3ya1 d1ojma1 d1ojna1 d1f9ga1 d1n7qa1 d1n7ra1 d1lxka1 d1n7oa1 d1ojoa1
Alignment File: 48238.alig
Aligned Sequences: 48238_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48238_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(48, 51)]
Uniprot Nr [(335, 338)]

 Invariant Regions
Region1
Alignment Nr[(0, 47), (52, 370)]
Uniprot Nr[(287, 334), (339, 657)]
Superposition48238_superp_1.pdb.gz
Rasmol Script48238_superp_1.rsm
View in Jmol