STRuster

 STRuster results: 48159

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA-glycosylase
Superfamily: DNA-glycosylase
Family: DNA repair glycosylase, 2 C-terminal domains
Protein: 3-Methyladenine DNA glycosylase II (gene alkA or aidA)
Species: Escherichia coli
Species SCOP sunid: 48159

 Set description
Number of entries: 6
SCOP Entries: d1pvsa1 d1diza1 d1pvsb1 d1mpgb1 d1dizb1 d1mpga1
Alignment File: 48159.alig
Aligned Sequences: 48159_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48159_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(181, 182)]
Uniprot Nr [(281, 282)]

 Invariant Regions
Region1
Alignment Nr[(0, 180)]
Uniprot Nr[(100, 280)]
Superposition48159_superp_1.pdb.gz
Rasmol Script48159_superp_1.rsm
View in Jmol