STRuster

 STRuster results: 48063

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Di-copper centre-containing domain
Superfamily: Di-copper centre-containing domain
Family: Catechol oxidase
Protein: Catechol oxidase
Species: Sweet potato (Ipomoea batatas)
Species SCOP sunid: 48063

 Set description
Number of entries: 7
SCOP Entries: d1bt2b_ d1bt1a_ d1bt2a_ d1buga_ d1bt3a_ d1bugb_ d1bt1b_
Alignment File: 48063.alig
Aligned Sequences: 48063_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 48063_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(30, 42), (98, 102), (187, 188)]
Uniprot Nr [(31, 43), (99, 103), (188, 189)]

 Invariant Regions
Region1
Alignment Nr[(0, 29), (43, 97), (103, 186), (189, 340)]
Uniprot Nr[(1, 30), (44, 98), (104, 187), (190, 341)]
Superposition48063_superp_1.pdb.gz
Rasmol Script48063_superp_1.rsm
View in Jmol