STRuster

 STRuster results: 47998

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DEATH domain
Superfamily: DEATH domain
Family: Caspase recruitment domain, CARD
Protein: Apoptotic protease activating factor 1, APAF-1
Species: Human (Homo sapiens)
Species SCOP sunid: 47998

 Set description
Number of entries: 3
SCOP Entries: d3ygsc_ d1cy5a_ d2ygsa_
Alignment File: 47998.alig
Aligned Sequences: 47998_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47998_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(90, 94)]
Uniprot Nr [(91, 95)]

 Invariant Regions
Region1
Alignment Nr[(0, 89)]
Uniprot Nr[(1, 90)]
Superposition47998_superp_1.pdb.gz
Rasmol Script47998_superp_1.rsm
View in Jmol