STRuster

 STRuster results: 47830

 SCOP 1.71 classification
Class: All alpha proteins
Fold: SAM domain-like
Superfamily: lambda integrase-like, N-terminal domain
Family: lambda integrase-like, N-terminal domain
Protein: Flp recombinase
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 47830

 Set description
Number of entries: 12
SCOP Entries: d1p4ec1 d1floc1 d1p4ed1 d1flod1 d1m6xd1 d1p4ea1 d1floa1 d1m6xa1 d1p4eb1 d1flob1 d1m6xc1 d1m6xb1
Alignment File: 47830.alig
Aligned Sequences: 47830_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47830_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(69, 70), (105, 111), (127, 128)]
Uniprot Nr [(71, 72), (107, 113), (129, 130)]

 Invariant Regions
Region1
Alignment Nr[(0, 68), (71, 104)]
Uniprot Nr[(2, 70), (73, 106)]
Superposition47830_superp_1.pdb.gz
Rasmol Script47830_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(112, 126)]
Uniprot Nr[(114, 128)]
Superposition47830_superp_2.pdb.gz
Rasmol Script47830_superp_2.rsm
View in Jmol