STRuster

 STRuster results: 47818

 SCOP 1.71 classification
Class: All alpha proteins
Fold: SAM domain-like
Superfamily: 5' to 3' exonuclease, C-terminal subdomain
Family: 5' to 3' exonuclease, C-terminal subdomain
Protein: Flap endonuclease-1 (Fen-1 nuclease)
Species: Archaeon Pyrococcus furiosus
Species SCOP sunid: 47818

 Set description
Number of entries: 2
SCOP Entries: d1b43a1 d1b43b1
Alignment File: 47818.alig
Aligned Sequences: 47818_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 47818_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(43, 48), (107, 119)]
Uniprot Nr [(264, 269), (328, 340)]

 Invariant Regions
Region1
Alignment Nr[(0, 42), (49, 106)]
Uniprot Nr[(221, 263), (270, 327)]
Superposition47818_superp_1.pdb.gz
Rasmol Script47818_superp_1.rsm
View in Jmol