STRuster

 STRuster results: 47555

 SCOP 1.71 classification
Class: All alpha proteins
Fold: EF Hand-like
Superfamily: EF-hand
Family: Penta-EF-hand proteins
Protein: Calpain small (regulatory) subunit (domain VI)
Species: Pig (Sus scrofa)
Species SCOP sunid: 47555

 Set description
Number of entries: 10
SCOP Entries: d1nx2a_ d1alwa_ d1nx0b_ d1alvb_ d1nx1b_ d1alwb_ d1nx1a_ d1alva_ d1nx0a_ d1nx3a_
Alignment File: 47555.alig
Aligned Sequences: 47555_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47555_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 14), (151, 154)]
Uniprot Nr [(94, 108), (245, 248)]

 Invariant Regions
Region1
Alignment Nr[(15, 150), (155, 172)]
Uniprot Nr[(109, 244), (249, 266)]
Superposition47555_superp_1.pdb.gz
Rasmol Script47555_superp_1.rsm
View in Jmol