STRuster

 STRuster results: 47471

 SCOP 1.71 classification
Class: All alpha proteins
Fold: HLH-like
Superfamily: HLH, helix-loop-helix DNA-binding domain
Family: HLH, helix-loop-helix DNA-binding domain
Protein: SREBP-1a
Species: Human (Homo sapiens)
Species SCOP sunid: 47471

 Set description
Number of entries: 4
SCOP Entries: d1am9b_ d1am9d_ d1am9c_ d1am9a_
Alignment File: 47471.alig
Aligned Sequences: 47471_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47471_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (74, 81)]
Uniprot Nr [(319, 321), (393, 400)]

 Invariant Regions
Region1
Alignment Nr[(3, 73)]
Uniprot Nr[(322, 392)]
Superposition47471_superp_1.pdb.gz
Rasmol Script47471_superp_1.rsm
View in Jmol