STRuster

 STRuster results: 47288

 SCOP 1.71 classification
Class: All alpha proteins
Fold: 4-helical cytokines
Superfamily: 4-helical cytokines
Family: Short-chain cytokines
Protein: Erythropoietin
Species: Human (Homo sapiens)
Species SCOP sunid: 47288

 Set description
Number of entries: 2
SCOP Entries: d1cn4c_ d1eera_
Alignment File: 47288.alig
Aligned Sequences: 47288_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 47288_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (30, 32), (52, 57), (81, 88), (116, 131)]
Uniprot Nr [(28, 31), (58, 60), (80, 85), (109, 116), (144, 159)]

 Invariant Regions
Region1
Alignment Nr[(4, 29), (33, 51), (58, 80), (89, 115), (132, 165)]
Uniprot Nr[(32, 57), (61, 79), (86, 108), (117, 143), (160, 193)]
Superposition47288_superp_1.pdb.gz
Rasmol Script47288_superp_1.rsm
View in Jmol