| STRuster results: 47225 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | Four-helical up-and-down bundle |
| Superfamily: | alpha-catenin/vinculin |
| Family: | alpha-catenin/vinculin |
| Protein: | Vinculin |
| Species: | Chicken (Gallus gallus) |
| Species SCOP sunid: | 47225 |
| Set description |
| Number of entries: | 12 |
| SCOP Entries: | d1st6a8 d1qkrb_ d1qkra_ d1st6a6 d1st6a7 d1st6a4 d1st6a5 d1st6a2 d1st6a3 d1st6a1 d1t01a2 d1t01a1 |
| Alignment File: | 47225.alig |
| Aligned Sequences: | 47225_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 47225_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 119), (177, 178), (197, 202), (218, 220), (251, 251), (273, 318), (335, 510), (528, 576), (587, 631), (653, 654), (678, 685), (709, 752), (764, 765), (777, 849), (880, 889), (905, 906), (946, 948), (997, 1017), (1080, 1085), (1097, 1098), (1126, 1142)] |
| Uniprot Nr | [(0, 119), (177, 178), (197, 202), (218, 220), (251, 251), (273, 318), (335, 510), (528, 576), (587, 631), (653, 654), (678, 685), (709, 752), (764, 765), (777, 849), (880, 889), (905, 906), (946, 948), (993, 1011), (1073, 1078), (1089, 1090), (1117, 1133)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(120, 176), (179, 196), (203, 217), (221, 250), (252, 272), (319, 334), (577, 586), (632, 652), (655, 677), (686, 708), (753, 763), (766, 776), (907, 945), (949, 996), (1018, 1079), (1086, 1096), (1099, 1125)] |
| Uniprot Nr | [(120, 176), (179, 196), (203, 217), (221, 250), (252, 272), (319, 334), (577, 586), (632, 652), (655, 677), (686, 708), (753, 763), (766, 776), (907, 945), (949, 993), (1012, 1072), (1079, 1089), (1091, 1116)] |
| Superposition | - |
