STRuster

 STRuster results: 47187

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Four-helical up-and-down bundle
Superfamily: Cytochromes
Family: Cytochrome c'-like
Protein: Cytochrome c'
Species: Rhodopseudomonas palustris
Species SCOP sunid: 47187

 Set description
Number of entries: 4
SCOP Entries: d1a7va_ d1mqvb_ d1a7vb_ d1mqva_
Alignment File: 47187.alig
Aligned Sequences: 47187_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47187_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (59, 62), (123, 124)]
Uniprot Nr [(22, 23), (81, 84), (145, 146)]

 Invariant Regions
Region1
Alignment Nr[(2, 58), (63, 122)]
Uniprot Nr[(24, 80), (85, 144)]
Superposition47187_superp_1.pdb.gz
Rasmol Script47187_superp_1.rsm
View in Jmol