STRuster

 STRuster results: 47178

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Four-helical up-and-down bundle
Superfamily: Cytochromes
Family: Cytochrome b562
Protein: Cytochrome b562
Species: Escherichia coli
Species SCOP sunid: 47178

 Set description
Number of entries: 3
SCOP Entries: d1lm3b_ d1lm3d_ d1m6ta_
Alignment File: 47178.alig
Aligned Sequences: 47178_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 47178_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (19, 20), (48, 49), (96, 105)]
Uniprot Nr [(23, 24), (42, 43), (71, 72), (119, 128)]

 Invariant Regions
Region1
Alignment Nr[(2, 18), (21, 47), (50, 95)]
Uniprot Nr[(25, 41), (44, 70), (73, 118)]
Superposition47178_superp_1.pdb.gz
Rasmol Script47178_superp_1.rsm
View in Jmol