STRuster

 STRuster results: 47101

 SCOP 1.71 classification
Class: All alpha proteins
Fold: HMG-box
Superfamily: HMG-box
Family: HMG-box
Protein: HMG-D
Species: Drosophila melanogaster
Species SCOP sunid: 47101

 Set description
Number of entries: 2
SCOP Entries: d1qrva_ d1qrvb_
Alignment File: 47101.alig
Aligned Sequences: 47101_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 47101_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (70, 72)]
Uniprot Nr [(2, 3), (72, 74)]

 Invariant Regions
Region1
Alignment Nr[(2, 69)]
Uniprot Nr[(4, 71)]
Superposition47101_superp_1.pdb.gz
Rasmol Script47101_superp_1.rsm
View in Jmol